Module dadi.Triallele

Modeling triallelic data.

"""
Modeling triallelic data.
"""
from . import numerics, integration, demographics, plotting, TriSpectrum_mod
TriSpectrum = TriSpectrum_mod.TriSpectrum

Sub-modules

dadi.Triallele.TriSpectrum_mod

Contains triallelic Spectrum object

dadi.Triallele.demographics

Equilibrium, two epoch, and three epoch (bottleneck) model with selection (sig1, sig2) on the two derived alleles

dadi.Triallele.integration

Integration of phi for triallelic diffusion These methods include ones for the injection of density for new triallelic sites and integration forward …

dadi.Triallele.numerics

dadi.Triallele.plotting

dadi.Triallele.transition1

dadi.Triallele.transition12

dadi.Triallele.transition1D

dadi.Triallele.transition2